Burkholderia pseudomallei K96243, BPSS1714

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02311
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 187 285 26.39
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 184 234 6.18E-9
Gene3D G3DSA:1.10.10.60 180 289 4.8E-27
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 206 284 1.4E-20
MobiDBLite mobidb-lite consensus disorder prediction 296 324 -
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 200 283 9.8E-25
Gene3D G3DSA:2.60.120.10 IPR014710 RmlC-like jelly roll fold 23 101 2.1E-6
SUPERFAMILY SSF51182 IPR011051 RmlC-like cupin domain superfamily 11 142 6.76E-8
Pfam PF02311 AraC-like ligand binding domain IPR003313 AraC-type arabinose-binding/dimerisation domain 15 110 1.0E-6
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 236 284 3.4E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.