Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
ProSiteProfiles | PS50931 | LysR-type HTH domain profile. | IPR000847 | Transcription regulator HTH, LysR | 2 | 59 | 25.538 |
CDD | cd08422 | PBP2_CrgA_like | 92 | 296 | 1.18838E-58 | ||
SUPERFAMILY | SSF46785 | IPR036390 | Winged helix DNA-binding domain superfamily | 3 | 87 | 8.39E-23 | |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 4 | 63 | 7.3E-19 |
Gene3D | G3DSA:3.40.190.10 | 91 | 296 | 3.3E-50 | |||
SUPERFAMILY | SSF53850 | 89 | 303 | 5.89E-35 | |||
Coils | Coil | 66 | 86 | - | |||
Gene3D | G3DSA:3.40.190.10 | 166 | 271 | 3.3E-50 | |||
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 88 | 299 | 3.2E-35 |
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 2 | 89 | 8.0E-28 |