Strain |
Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest |
Locus Tag |
BPSS1627
|
Name |
bpscN2
Synonym: sctN |
Replicon | chromosome 2 |
Genomic location | 2200938 - 2202266 (+ strand) |
Comment | This gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). |
RefSeq | YP_111635.1 |
GI | 53722650 |
Entrez | 3095522 |
GI | 53722650 |
INSDC | CAH39102.1 |
NCBI Locus Tag | BPSS1627 |
RefSeq | YP_111635.1,GeneID |
UniParc | UPI000043BD7E |
UniProtKB Acc | Q63JT7 |
UniProtKB ID | Q63JT7_BURPS |
UniRef100 | UniRef100_Q3JKQ8 |
UniRef50 | UniRef50_P40291 |
UniRef90 | UniRef90_Q3JKQ8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type III secretion system ATPase BpscN2 (T3SS-2)
|
Synonyms |
type III secretion system ATPase |
Evidence for Translation | |
Charge (pH 7) | -3.62 |
Kyte-Doolittle Hydrophobicity Value | 0.070 |
Molecular Weight (kDa) | 47113.6 |
Isoelectric Point (pI) | 6.04 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 666 genera
|
Burkholderia Ortholog Group |
BG003796 (728 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BPSS1627
Search term: bpscN2
Search term: type III secretion system ATPase BpscN2 (T3SS-2)
|
Ensembl
97, assembly
GRCh38.p12
|
ATP synthase F1 subunit alpha [Source:HGNC Symbol;Acc:HGNC:823]
E-value:
4.2e-35
Percent Identity:
30.1
|
Ensembl
97, assembly
GRCh38.p12
|
ATP synthase F1 subunit alpha [Source:HGNC Symbol;Acc:HGNC:823]
E-value:
4.2e-35
Percent Identity:
30.1
|
Ensembl
97, assembly
GRCh38.p12
|
ATP synthase F1 subunit alpha [Source:HGNC Symbol;Acc:HGNC:823]
E-value:
4.2e-35
Percent Identity:
30.1
|
Type III secretion system cluster 3 is required for maximal virulence of Burkholderia pseudomallei in a hamster infection model.
Warawa J, Woods DE
FEMS Microbiol Lett 2005 Jan 1;242(1):101-8
PubMed ID: 15621426
|
Type III Secretion in the Melioidosis Pathogen <i>Burkholderia pseudomallei</i>.
Vander Broek CW, Stevens JM
Front Cell Infect Microbiol 2017;7:255
PubMed ID: 28664152
|