Burkholderia pseudomallei K96243, BPSS1627 (bpscN2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0030254 protein secretion by the type III secretion system
TAS
Traceable Author Statement 		ECO:0000304
traceable author statement used in manual assertion		 28664152 Reviewed by curator
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02546
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0046034 ATP metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02874
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02546
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0030254 protein secretion by the type III secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02546
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01026
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01026
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006754 ATP biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02546
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:1902600 proton transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02874
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046961 proton-transporting ATPase activity, rotational mechanism
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02546
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0030257 type III protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02546
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc ATP biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00195 Photosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00190 Oxidative phosphorylation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain 152 361 6.6E-72
SMART SM00382 IPR003593 AAA+ ATPase domain 164 346 6.7E-9
CDD cd18117 ATP-synt_flagellum-secretory_path_III_N 27 96 1.39726E-17
Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain 30 93 1.6E-5
TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family IPR005714 ATPase, type III secretion system, FliI/YscN 14 441 1.4E-165
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 99 367 2.82E-96
TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase IPR013380 ATPase, type III secretion system, H+-transporting 24 441 7.0E-198
Pfam PF18269 T3SS EscN ATPase C-terminal domain IPR040627 T3SS EscN ATPase, C-terminal 369 439 2.2E-24
Gene3D G3DSA:3.40.50.12240 19 441 6.8E-146
ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site 352 361 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.