Burkholderia pseudomallei K96243, BPSS1620 (bpscV2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0030254 protein secretion by the type III secretion system
TAS
Traceable Author Statement
ECO:0000304
traceable author statement used in manual assertion
28664152 Reviewed by curator
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01399
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00771
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00771
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01399
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 67 86 6.4E-52
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 148 166 6.4E-52
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 229 243 6.4E-52
PIRSF PIRSF005419 IPR001712 Type III secretion system FHIPEP 3 688 2.5E-224
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 178 195 6.4E-52
Gene3D G3DSA:1.10.8.540 IPR042193 FHIPEP, domain 3 495 584 9.5E-28
Pfam PF00771 FHIPEP family IPR001712 Type III secretion system FHIPEP 23 674 7.2E-212
ProSitePatterns PS00994 Bacterial export FHIPEP family signature. IPR025505 FHIPEP conserved site 134 157 -
TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family IPR006302 Type III secretion protein HrcV 12 682 1.4E-261
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 129 145 6.4E-52
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 30 43 6.4E-52
Gene3D G3DSA:1.10.490.80 IPR042196 FHIPEP, domain 4 586 682 1.4E-27
Gene3D G3DSA:3.40.30.60 IPR042194 FHIPEP, domain 1 359 494 2.7E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.