Burkholderia pseudomallei K96243, BPSS1604

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00156
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps02020 Two-component system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 160 231 7.8E-18
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 9 121 6.2E-31
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 138 232 7.37E-20
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 144 231 5.15872E-21
ProSiteProfiles PS51755 OmpR/PhoB-type DNA-binding domain profile. IPR001867 OmpR/PhoB-type DNA-binding domain 135 233 26.08
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 11 121 3.0E-27
Gene3D G3DSA:3.40.50.2300 1 135 2.4E-32
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 136 233 2.0E-22
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 13 125 4.2532E-22
SMART SM00862 IPR001867 OmpR/PhoB-type DNA-binding domain 156 231 1.5E-16
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 10 125 40.75
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 8 170 5.83E-36

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.