Burkholderia pseudomallei K96243, BPSS1533 (bicA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0030254 protein secretion by the type III secretion system
TAS
Traceable Author Statement 		ECO:0000304
traceable author statement used in manual assertion		 28664152 Reviewed by curator
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48452
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD 108 130 6.4E-14
PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD 76 98 6.4E-14
PIRSF PIRSF003165 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup 1 166 2.0E-64
PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD 27 50 6.4E-14
SUPERFAMILY SSF48452 IPR011990 Tetratricopeptide-like helical domain superfamily 41 145 5.9E-13
PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD 52 71 6.4E-14
Pfam PF07720 Tetratricopeptide repeat IPR011716 Tetratricopeptide TPR-3 41 74 3.3E-11
Gene3D G3DSA:1.25.40.10 IPR011990 Tetratricopeptide-like helical domain superfamily 11 159 9.7E-55
Pfam PF07720 Tetratricopeptide repeat IPR011716 Tetratricopeptide TPR-3 76 108 7.3E-7
TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD 25 154 2.2E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.