Burkholderia pseudomallei K96243, BPSS1502 (tssH-5)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	TAS Traceable Author Statement	ECO:0000304 traceable author statement used in manual assertion	17660433	Reviewed by curator
Biological Process	GO:0019538	protein metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:1.10.1780.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00300	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bps03070	Bacterial secretion system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
TIGRFAM	TIGR03345	VI_ClpV1: type VI secretion ATPase, ClpV1 family	IPR017729	Type VI secretion system, ATPase ClpV1	13	941	0.0
Coils	Coil				592	612	-
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	227	336	4.7E-9
Gene3D	G3DSA:1.10.8.60				857	953	2.7E-11
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	857	926	1.5E-11
Coils	Coil				434	457	-
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	764	782	9.5E-33
Gene3D	G3DSA:3.40.50.300				596	856	1.4E-77
Gene3D	G3DSA:3.40.50.300				365	563	2.4E-42
SMART	SM01086		IPR019489	Clp ATPase, C-terminal	857	950	7.0E-9
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	638	925	6.44E-62
Gene3D	G3DSA:1.10.1780.10		IPR036628	Clp, N-terminal domain superfamily	5	161	2.8E-38
SUPERFAMILY	SSF81923		IPR036628	Clp, N-terminal domain superfamily	11	123	2.22E-17
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	183	507	1.87E-69
SMART	SM00382		IPR003593	AAA+ ATPase domain	686	834	1.9E-10
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	365	456	5.3E-33
MobiDBLite	mobidb-lite	consensus disorder prediction			956	970	-
MobiDBLite	mobidb-lite	consensus disorder prediction			954	1012	-
Gene3D	G3DSA:3.40.50.300				172	364	5.9E-63
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, N-terminal	28	75	1.9E-5
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	690	708	9.5E-33
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	797	811	9.5E-33
ProSitePatterns	PS00870	Chaperonins clpA/B signature 1.	IPR018368	ClpA/B, conserved site 1	316	328	-
SMART	SM00382		IPR003593	AAA+ ATPase domain	221	366	8.3E-8
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	685	852	7.1E-41
CDD	cd00009	AAA			661	820	3.07705E-18
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	735	753	9.5E-33
CDD	cd00009	AAA			203	356	7.14371E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.