Burkholderia pseudomallei K96243, BPSS1390 (bpscC)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0030254	protein secretion by the type III secretion system	TAS Traceable Author Statement	ECO:0000304 traceable author statement used in manual assertion	28664152	Reviewed by curator
Biological Process	GO:0009306	protein secretion	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02516	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bps03070	Bacterial secretion system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF03958	Bacterial type II/III secretion system short domain	IPR005644	NolW-like	111	168	1.1E-7
PRINTS	PR01337	Type III secretion system outer membrane G protein family signature	IPR003522	Type III secretion system outer membrane pore YscC/HrcC	563	582	1.1E-30
Gene3D	G3DSA:3.55.50.30				23	106	4.0E-23
TIGRFAM	TIGR02516	type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family	IPR003522	Type III secretion system outer membrane pore YscC/HrcC	291	585	9.1E-112
PRINTS	PR01337	Type III secretion system outer membrane G protein family signature	IPR003522	Type III secretion system outer membrane pore YscC/HrcC	440	459	1.1E-30
Pfam	PF00263	Bacterial type II and III secretion system protein	IPR004846	Type II/III secretion system	427	585	3.3E-37
PRINTS	PR01337	Type III secretion system outer membrane G protein family signature	IPR003522	Type III secretion system outer membrane pore YscC/HrcC	340	360	1.1E-30
PRINTS	PR01337	Type III secretion system outer membrane G protein family signature	IPR003522	Type III secretion system outer membrane pore YscC/HrcC	191	208	1.1E-30
ProSitePatterns	PS00875	Bacterial type II secretion system protein D signature.	IPR004845	Type II secretion system GspD, conserved site	530	563	-
MobiDBLite	mobidb-lite	consensus disorder prediction			276	303	-
PRINTS	PR01337	Type III secretion system outer membrane G protein family signature	IPR003522	Type III secretion system outer membrane pore YscC/HrcC	474	489	1.1E-30
Pfam	PF03958	Bacterial type II/III secretion system short domain	IPR005644	NolW-like	179	337	1.9E-14
Gene3D	G3DSA:3.30.1370.120		IPR038591	NolW-like superfamily	107	175	4.3E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.