Burkholderia pseudomallei K96243, BPSL2088

Gene Feature Overview

Strain	Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1 GCF_000011545.1|latest
Locus Tag	BPSL2088
Name
Replicon	chromosome 1
Genomic location	2508020 - 2508742 (+ strand)

Cross-References

RefSeq	YP_108686.1
GI	53719700
Entrez	3094426
GI	53719700
INSDC	CAH36091.1
NCBI Locus Tag	BPSL2088
RefSeq	YP_108686.1,GeneID
UniParc	UPI000043B24F
UniProtKB Acc	Q63T80
UniProtKB ID	Q63T80_BURPS
UniRef100	UniRef100_Q63T80
UniRef50	UniRef50_Q63T80
UniRef90	UniRef90_Q63T80

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.86
Kyte-Doolittle Hydrophobicity Value	-0.165
Molecular Weight (kDa)	26134.4
Isoelectric Point (pI)	5.34

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
4RHO	STRUCTURAL GENOMICS, UNKNOWN FUNCTION	10/02/14	Crystal structure of a hypothetical protein (BPSL2088) from Burkholderia pseudomallei K96243 at 2.25 A resolution	BURKHOLDERIA PSEUDOMALLEI K96243	2.25	X-RAY DIFFRACTION	100.0

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 13 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG020998 (270 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BPSL2088

Human Homologs

References