Burkholderia pseudomallei K96243, BPSL2012 (glnS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03950
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004819 glutamine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00440
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006425 glutaminyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00440
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03950
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50715
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0043039 tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00970 Aminoacyl-tRNA biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps00970 Aminoacyl-tRNA biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site 38 49 -
Gene3D G3DSA:3.90.800.10 109 217 1.2E-102
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 218 228 1.1E-9
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 64 77 1.1E-9
TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase IPR004514 Glutamine-tRNA synthetase 32 567 9.4E-225
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 49 60 1.1E-9
SUPERFAMILY SSF50715 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily 353 564 3.82E-75
Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain 353 544 3.2E-59
SUPERFAMILY SSF52374 32 358 4.02E-93
Gene3D G3DSA:1.10.1160.10 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily 274 352 1.7E-30
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 35 47 1.1E-9
Hamap MF_00126 Glutamine--tRNA ligase [glnS]. IPR022861 Glutamine-tRNA ligase, bacterial 1 565 53.604
Gene3D G3DSA:3.40.50.620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 33 256 1.2E-102
CDD cd00807 GlnRS_core 31 355 7.5878E-141
Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain 32 335 5.0E-104
Gene3D G3DSA:2.40.240.10 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal 353 562 4.1E-79
Gene3D G3DSA:2.40.240.10 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal 361 480 4.1E-79

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.