Burkholderia pseudomallei K96243, BPSL1980 (valS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006438 valyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.287.380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.287.380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00133
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006438 valyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.287.380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00133
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00133
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004832 valine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.287.380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.287.380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0002161 aminoacyl-tRNA editing activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50677
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004832 valine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.287.380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.287.380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.287.380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.287.380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.287.380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0002161 aminoacyl-tRNA editing activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50677
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00133
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00970 Aminoacyl-tRNA biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps00970 Aminoacyl-tRNA biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.90.740.10 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 202 339 2.3E-52
Pfam PF10458 Valyl tRNA synthetase tRNA binding arm IPR019499 Valyl-tRNA synthetase, tRNA-binding arm 889 953 3.2E-20
PRINTS PR00986 Valyl-tRNA synthetase signature IPR002303 Valine-tRNA ligase 350 363 1.5E-35
PRINTS PR00986 Valyl-tRNA synthetase signature IPR002303 Valine-tRNA ligase 463 484 1.5E-35
PRINTS PR00986 Valyl-tRNA synthetase signature IPR002303 Valine-tRNA ligase 494 512 1.5E-35
CDD cd00817 ValRS_core 38 618 0.0
Gene3D G3DSA:1.10.730.10 573 824 4.5E-66
Gene3D G3DSA:1.10.287.380 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily 882 954 2.2E-16
TIGRFAM TIGR00422 valS: valine--tRNA ligase IPR002303 Valine-tRNA ligase 7 935 0.0
Gene3D G3DSA:3.40.50.620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 7 201 1.0E-60
SUPERFAMILY SSF46589 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm 889 953 1.46E-17
SUPERFAMILY SSF52374 4 629 7.17E-134
Hamap MF_02004 Valine--tRNA ligase [valS]. IPR002303 Valine-tRNA ligase 6 954 15.643
SUPERFAMILY SSF47323 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding 630 904 5.05E-60
PRINTS PR00986 Valyl-tRNA synthetase signature IPR002303 Valine-tRNA ligase 40 51 1.5E-35
CDD cd07962 Anticodon_Ia_Val IPR033705 Valyl tRNA synthetase, anticodon-binding domain 618 764 6.45223E-63
Pfam PF00133 tRNA synthetases class I (I, L, M and V) IPR002300 Aminoacyl-tRNA synthetase, class Ia 22 619 3.3E-206
SUPERFAMILY SSF50677 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 195 346 3.14E-62
PRINTS PR00986 Valyl-tRNA synthetase signature IPR002303 Valine-tRNA ligase 234 251 1.5E-35
Gene3D G3DSA:3.40.50.620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 340 570 5.2E-62
Coils Coil 887 914 -
ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site 47 58 -
Pfam PF08264 Anticodon-binding domain of tRNA IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding 674 829 5.3E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.