Burkholderia pseudomallei K96243, BPSL1942 (rplT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019843 rRNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF74731 IPR035566 Ribosomal protein L20, C-terminal 2 116 2.49E-50
Pfam PF00453 Ribosomal protein L20 IPR005813 Ribosomal protein L20 3 109 1.2E-49
PRINTS PR00062 Ribosomal protein L20 signature IPR005813 Ribosomal protein L20 12 41 2.2E-40
Gene3D G3DSA:1.10.720.90 2 55 7.9E-26
Hamap MF_00382 50S ribosomal protein L20 [rplT]. IPR005813 Ribosomal protein L20 2 115 30.092
TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 IPR005813 Ribosomal protein L20 1 114 1.6E-49
PRINTS PR00062 Ribosomal protein L20 signature IPR005813 Ribosomal protein L20 42 71 2.2E-40
ProSitePatterns PS00937 Ribosomal protein L20 signature. IPR005813 Ribosomal protein L20 54 70 -
PRINTS PR00062 Ribosomal protein L20 signature IPR005813 Ribosomal protein L20 75 101 2.2E-40
Gene3D G3DSA:1.10.1900.20 IPR035566 Ribosomal protein L20, C-terminal 56 118 4.5E-29
CDD cd07026 Ribosomal_L20 IPR005813 Ribosomal protein L20 6 111 2.20642E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.