Burkholderia pseudomallei K96243, BPSL1909 (sucA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00239
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030976 thiamine pyrophosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00239
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00239
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00239
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00239
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030976 thiamine pyrophosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00239
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00676
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006099 tricarboxylic acid cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00239
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006099 tricarboxylic acid cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00239
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00676
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00380 Tryptophan metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps00380 Tryptophan metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00310 Lysine degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps00020 Citrate cycle (TCA cycle) 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00020 Citrate cycle (TCA cycle) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps01200 Carbon metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc 2-oxoglutarate decarboxylation to succinyl-CoA InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps01120 Microbial metabolism in diverse environments 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01130 Biosynthesis of antibiotics 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps00310 Lysine degradation 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF000157 IPR011603 2-oxoglutarate dehydrogenase E1 component 1 946 0.0
Pfam PF02779 Transketolase, pyrimidine binding domain IPR005475 Transketolase-like, pyrimidine-binding domain 599 798 7.8E-66
Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain 12 49 7.7E-18
SUPERFAMILY SSF52518 IPR029061 Thiamin diphosphate-binding fold 583 804 8.51E-51
Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal 802 944 2.7E-51
Gene3D G3DSA:3.40.50.12470 563 813 1.1E-173
Gene3D G3DSA:1.10.287.1150 89 171 5.3E-24
Gene3D G3DSA:3.40.50.11610 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily 734 941 1.1E-173
TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component IPR011603 2-oxoglutarate dehydrogenase E1 component 14 943 0.0
CDD cd02016 TPP_E1_OGDC_like 220 481 4.24847E-167
Gene3D G3DSA:3.40.50.970 172 535 2.5E-145
Pfam PF00676 Dehydrogenase E1 component IPR001017 Dehydrogenase, E1 component 221 524 2.7E-49
SMART SM00861 IPR005475 Transketolase-like, pyrimidine-binding domain 600 797 3.4E-62
SUPERFAMILY SSF52518 IPR029061 Thiamin diphosphate-binding fold 126 552 2.0E-89

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.