Burkholderia pseudomallei K96243, BPSL1542

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006520 cellular amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01324
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019346 transsulfuration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001434
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.1150.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001434
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004121 cystathionine beta-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01324
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc glutathione-mediated detoxification II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps00450 Selenocompound metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc glucosinolate biosynthesis from homomethionine InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc glucosinolate biosynthesis from tyrosine InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc glucosinolate biosynthesis from tryptophan InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps00270 Cysteine and methionine metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc glucosinolate biosynthesis from phenylalanine InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc seleno-amino acid biosynthesis (plants) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00450 Selenocompound metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps01230 Biosynthesis of amino acids 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00270 Cysteine and methionine metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc homocysteine and cysteine interconversion InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.90.1150.10 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 261 392 1.1E-32
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 30 390 4.81E-87
PIRSF PIRSF001434 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme 1 392 1.1E-111
TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase IPR006233 Cystathionine beta-lyase, bacterial 27 390 1.7E-119
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major domain 6 259 3.6E-62
Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme 12 389 2.7E-86

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.