Burkholderia pseudomallei K96243, BPSL1532

Gene Feature Overview

Strain	Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1 GCF_000011545.1|latest
Locus Tag	BPSL1532
Name
Replicon	chromosome 1
Genomic location	1774462 - 1775649 (+ strand)

Cross-References

RefSeq	YP_108152.1
GI	53719166
Entrez	3091888
GI	53719166
INSDC	CAH35533.1
NCBI Locus Tag	BPSL1532
RefSeq	YP_108152.1,GeneID
UniParc	UPI000043B03D
UniProtKB Acc	Q63UR4
UniProtKB ID	Q63UR4_BURPS
UniRef100	UniRef100_A0A095IDH7
UniRef50	UniRef50_Q8XYX8
UniRef90	UniRef90_Q62JY5

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribosomal large subunit pseudouridine synthase D
Synonyms
Evidence for Translation
Charge (pH 7)	-7.40
Kyte-Doolittle Hydrophobicity Value	-0.308
Molecular Weight (kDa)	42548.3
Isoelectric Point (pI)	5.79

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG001630 (652 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BPSL1532 Search term: ribosomal large subunit pseudouridine synthase D

Human Homologs

Ensembl 97, assembly GRCh38.p12	ENSP00000455026 RNA pseudouridine synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173] E-value: 4.2e-18 Percent Identity: 34.6
Ensembl 97, assembly GRCh38.p12	ENSP00000007264 RNA pseudouridine synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173] E-value: 4.2e-18 Percent Identity: 34.6

References