Burkholderia pseudomallei K96243, BPSL1513 (ispG)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044237 cellular metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.20.20.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016114 terpenoid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004640
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008299 isoprenoid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004640
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01130 Biosynthesis of antibiotics 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps00900 Terpenoid backbone biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00900 Terpenoid backbone biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF004640 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial 3 412 1.4E-127
TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type 9 401 4.8E-114
Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type 10 406 27.557
SUPERFAMILY SSF56014 300 407 8.5E-7
Pfam PF04551 GcpE protein IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type 23 402 1.1E-110
Gene3D G3DSA:3.30.413.10 296 413 1.8E-38
Gene3D G3DSA:3.20.20.20 IPR011005 Dihydropteroate synthase-like 5 295 3.9E-93

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.