Burkholderia pseudomallei K96243, BPSL0891

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00392
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00392
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00866
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF07702 UTRA domain IPR011663 UbiC transcription regulator-associated 106 241 1.1E-35
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 10 86 5.7E-23
SMART SM00345 IPR000524 Transcription regulator HTH, GntR 26 85 1.5E-17
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 15 89 9.81E-22
Pfam PF00392 Bacterial regulatory proteins, gntR family IPR000524 Transcription regulator HTH, GntR 22 85 5.6E-17
SUPERFAMILY SSF64288 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 73 247 3.14E-45
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 59 75 6.3E-10
SMART SM00866 IPR011663 UbiC transcription regulator-associated 105 241 1.9E-36
CDD cd07377 WHTH_GntR IPR000524 Transcription regulator HTH, GntR 21 85 1.64094E-22
ProSiteProfiles PS50949 GntR-type HTH domain profile. IPR000524 Transcription regulator HTH, GntR 20 88 21.997
Gene3D G3DSA:3.40.1410.10 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 90 248 8.5E-43
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 45 59 6.3E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.