Burkholderia pseudomallei K96243, BPSL0731

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 247 349 6.5E-64
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 89 146 1.7E-17
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 87 172 7.0E-26
SUPERFAMILY SSF53850 174 381 1.68E-42
ProSiteProfiles PS50931 LysR-type HTH domain profile. IPR000847 Transcription regulator HTH, LysR 86 143 22.909
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 172 377 4.0E-39
CDD cd08472 PBP2_CrgA_like_3 176 377 1.92115E-106
MobiDBLite mobidb-lite consensus disorder prediction 389 408 -
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 88 164 8.18E-20
Gene3D G3DSA:3.40.190.10 175 376 6.5E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.