Burkholderia pseudomallei K96243, BPSL0644 (aspS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF55261
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01336
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016874 ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00459
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00152
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00152
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00152
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00152
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps00970 Aminoacyl-tRNA biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS50862 Aminoacyl-transfer RNA synthetases class-II family profile. IPR006195 Aminoacyl-tRNA synthetase, class II 139 562 19.011
Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. IPR004524 Aspartate-tRNA ligase, type 1 1 591 33.34
CDD cd04317 EcAspRS_like_N 2 135 4.7691E-69
Pfam PF01336 OB-fold nucleic acid binding domain IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type 18 101 9.5E-17
SUPERFAMILY SSF55681 111 592 2.19E-105
PRINTS PR01042 Aspartyl-tRNA synthetase signature IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb 208 221 1.3E-26
Gene3D G3DSA:2.40.50.140 1 105 1.1E-33
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 1 105 4.38E-33
PRINTS PR01042 Aspartyl-tRNA synthetase signature IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb 191 203 1.3E-26
SUPERFAMILY SSF55261 IPR004115 GAD-like domain superfamily 292 417 4.25E-42
PRINTS PR01042 Aspartyl-tRNA synthetase signature IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb 525 539 1.3E-26
PRINTS PR01042 Aspartyl-tRNA synthetase signature IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb 481 497 1.3E-26
Pfam PF02938 GAD domain IPR029351 GAD domain 309 408 1.2E-25
Gene3D G3DSA:3.30.1360.30 IPR004115 GAD-like domain superfamily 273 427 1.0E-195
CDD cd00777 AspRS_core 139 566 2.02145E-167
Pfam PF00152 tRNA synthetases class II (D, K and N) IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) 119 565 9.8E-107
TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase IPR004524 Aspartate-tRNA ligase, type 1 1 589 2.5E-245
Gene3D G3DSA:3.30.930.10 118 589 1.0E-195

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.