Burkholderia pseudomallei K96243, BPSL0520

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00495
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00495
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00495
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008097 5S rRNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00495
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00495 Ribosomal_L25_TL5_CTC IPR029751 Ribosomal protein L25 2 92 2.018E-34
SUPERFAMILY SSF50715 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily 2 192 5.93E-50
TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form IPR001021 Ribosomal protein L25, long-form 6 174 1.1E-39
Gene3D G3DSA:2.170.120.20 IPR037121 Ribosomal protein L25, C-terminal 96 191 1.6E-22
Gene3D G3DSA:2.40.240.10 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal 1 93 1.6E-30
Hamap MF_01334 50S ribosomal protein L25 [rplY]. IPR001021 Ribosomal protein L25, long-form 1 184 29.596
Pfam PF14693 Ribosomal protein TL5, C-terminal domain IPR020057 Ribosomal protein L25, beta domain 98 186 3.7E-26
Pfam PF01386 Ribosomal L25p family IPR029751 Ribosomal protein L25 5 90 2.3E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.