Burkholderia pseudomallei K96243, BPSL0107

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 95 294 5.5E-58
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 6 94 5.9E-23
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 8 66 1.6E-18
Gene3D G3DSA:3.40.190.10 166 267 5.5E-58
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 91 300 6.1E-42
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 8 91 7.92E-20
CDD cd08422 PBP2_CrgA_like 95 294 4.31724E-63
SUPERFAMILY SSF53850 91 303 1.1E-44
ProSiteProfiles PS50931 LysR-type HTH domain profile. IPR000847 Transcription regulator HTH, LysR 5 62 26.519

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.