Burkholderia pseudomallei K96243, BPSL0101

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006281	DNA repair	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF48150	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006284	base-excision repair	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00056	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003824	catalytic activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF48150	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bps03410	Base excision repair	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF55945				16	114	3.61E-27
Pfam	PF00730	HhH-GPD superfamily base excision DNA repair protein	IPR003265	HhH-GPD domain	140	292	9.3E-8
Gene3D	G3DSA:3.30.310.20		IPR037046	DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily	16	134	2.0E-30
Pfam	PF06029	AlkA N-terminal domain	IPR010316	DNA-3-methyladenine glycosylase AlkA, N-terminal	17	134	7.4E-33
SMART	SM01009		IPR010316	DNA-3-methyladenine glycosylase AlkA, N-terminal	16	134	1.1E-45
CDD	cd00056	ENDO3c	IPR003265	HhH-GPD domain	136	300	1.96249E-20
Gene3D	G3DSA:1.10.1670.10		IPR023170	Helix-turn-helix, base-excision DNA repair, C-terminal	254	307	9.0E-9
SMART	SM00478		IPR003265	HhH-GPD domain	144	303	1.2E-7
SUPERFAMILY	SSF48150		IPR011257	DNA glycosylase	125	300	1.29E-41
Gene3D	G3DSA:1.10.340.30				135	253	2.1E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.