Burkholderia pseudomallei K96243, BPSL0007 (gspD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
IGC
Inferred from Genomic Context
ECO:0000177
genomic context evidence
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02517
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00263
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 268 406 1.1E-18
MobiDBLite mobidb-lite consensus disorder prediction 709 757 -
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 129 187 1.4E-11
Gene3D G3DSA:3.30.1370.120 IPR038591 NolW-like superfamily 189 262 3.2E-14
MobiDBLite mobidb-lite consensus disorder prediction 312 340 -
TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D IPR013356 Type II secretion system GspD 32 676 1.8E-218
Pfam PF00263 Bacterial type II and III secretion system protein IPR004846 Type II/III secretion system 501 666 5.0E-51
Gene3D G3DSA:3.30.1370.120 IPR038591 NolW-like superfamily 22 187 1.2E-60
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 528 538 5.1E-29
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 493 517 5.1E-29
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 192 262 6.8E-14
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 631 649 5.1E-29
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 406 416 5.1E-29
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 654 668 5.1E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.