Strain |
Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest |
Locus Tag |
BPSL0004
|
Name |
hupA
|
Replicon | chromosome 1 |
Genomic location | 5488 - 5766 (+ strand) |
RefSeq | YP_106629.1 |
GI | 53717643 |
Entrez | 3091972 |
GI | 53717643 |
INSDC | CAH33987.1 |
NCBI Locus Tag | BPSL0004 |
RefSeq | YP_106629.1,GeneID |
UniParc | UPI0000128EF2 |
UniProtKB Acc | P0DMK4 |
UniProtKB ID | DBHA_BURPS |
UniRef100 | UniRef100_I1WEI8 |
UniRef50 | UniRef50_I1WEI8 |
UniRef90 | UniRef90_I1WEI8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
DNA-binding protein HU-alpha
|
Synonyms | |
Evidence for Translation |
Detected in B. pseudomallei strain 844 using MALDI-TOF/MS analysis (13.1 kDa, pI 4.48, PMID:21960737)
|
Charge (pH 7) | 8.98 |
Kyte-Doolittle Hydrophobicity Value | -0.386 |
Molecular Weight (kDa) | 9621.0 |
Isoelectric Point (pI) | 10.99 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6N2L | DNA BINDING PROTEIN | 11/13/18 | Crystal structure of a histone family protein DNA-binding protein from Burkholderia ambifaria | BURKHOLDERIA AMBIFARIA (STRAIN MC40-6) | 1.85 | X-RAY DIFFRACTION | 98.9 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 569 genera
|
Burkholderia Ortholog Group |
BG000052 (653 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BPSL0004
Search term: hupA
Search term: DNA-binding protein HU-alpha
|