Burkholderia cenocepacia H111, I35_RS01730 (tssD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0033103 protein secretion by the type VI secretion system
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18316384 Reviewed by curator

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family IPR008514 Type VI secretion system effector, Hcp 15 147 9.7E-24
SUPERFAMILY SSF141452 IPR036624 Hcp1-like superfamily 1 162 9.15E-45
Pfam PF05638 Type VI secretion system effector, Hcp IPR008514 Type VI secretion system effector, Hcp 10 138 5.4E-38
Gene3D G3DSA:2.30.110.20 IPR036624 Hcp1-like superfamily 1 167 2.2E-56

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.