Burkholderia cenocepacia AU 1054, BCEN_RS21830

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003964 RNA-directed DNA polymerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00866
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00866
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006278 RNA-dependent DNA biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00866
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA 232 245 1.1E-8
PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA 106 119 1.1E-8
TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase IPR030931 Group II intron reverse transcriptase/maturase 55 399 5.2E-120
Pfam PF08388 Group II intron, maturase-specific domain IPR013597 Group II intron, maturase-specific 336 403 6.5E-16
SUPERFAMILY SSF56672 60 392 1.33E-52
Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IPR000477 Reverse transcriptase domain 111 316 2.2E-41
PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA 174 192 1.1E-8
CDD cd01651 RT_G2_intron 107 317 4.94671E-88
ProSiteProfiles PS50878 Reverse transcriptase (RT) catalytic domain profile. IPR000477 Reverse transcriptase domain 92 317 22.015

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.