Burkholderia cenocepacia AU 1054, BCEN_RS14875

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00347
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00347
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00090 HTH_ARSR 40 106 3.02313E-7
Gene3D G3DSA:1.10.10.10 IPR011991 Winged helix-turn-helix DNA-binding domain 6 147 1.4E-22
SMART SM00347 IPR000835 MarR-type HTH domain 31 131 4.3E-10
SUPERFAMILY SSF46785 IPR011991 Winged helix-turn-helix DNA-binding domain 13 144 1.11E-24
Pfam PF12802 MarR family 37 96 9.5E-14
ProSiteProfiles PS50995 MarR-type HTH domain profile. IPR000835 MarR-type HTH domain 11 143 19.3

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.