Burkholderia cenocepacia AU 1054, BCEN_RS14765 (gidA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0002098 tRNA wobble uridine modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00136
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13932 GidA associated domain IPR026904 GidA associated domain 3 403 626 2.8E-75
Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 5 634 42.781
ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. IPR020595 MnmG-related, conserved site 369 392 -
SMART SM01228 556 627 2.4E-42
TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 7 631 2.3E-274
Gene3D G3DSA:3.50.50.60 IPR036188 FAD/NAD(P)-binding domain superfamily 296 459 3.8E-57
Gene3D G3DSA:1.10.10.1800 460 560 1.2E-26
Gene3D G3DSA:3.50.50.60 IPR036188 FAD/NAD(P)-binding domain superfamily 2 222 1.3E-87
SUPERFAMILY SSF51905 IPR036188 FAD/NAD(P)-binding domain superfamily 6 262 2.84E-48
ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. IPR020595 MnmG-related, conserved site 274 288 -
Pfam PF01134 Glucose inhibited division protein A 8 400 1.2E-165
Gene3D G3DSA:1.10.150.570 579 632 1.8E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.