Burkholderia cenocepacia AU 1054, BCEN_RS14230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004888 transmembrane signaling receptor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02203
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50111
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06225
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50111
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00283 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 268 515 5.2E-91
ProSiteProfiles PS50111 Bacterial chemotaxis sensory transducers domain profile. IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 272 501 51.497
Gene3D G3DSA:1.20.120.30 23 190 2.2E-6
CDD cd06225 HAMP IPR003660 HAMP domain 217 261 1.63022E-6
Pfam PF02203 Tar ligand binding domain homologue IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding 1 176 4.7E-46
SMART SM00304 IPR003660 HAMP domain 215 267 8.9E-10
MobiDBLite mobidb-lite consensus disorder prediction 554 573 -
Coils Coil 291 311 -
SUPERFAMILY SSF47170 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily 26 178 2.09E-22
MobiDBLite mobidb-lite consensus disorder prediction 590 659 -
CDD cd11386 MCP_signal 295 486 2.47539E-54
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 443 472 2.3E-60
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 289 318 2.3E-60
ProSiteProfiles PS50885 HAMP domain profile. IPR003660 HAMP domain 215 267 9.461
CDD cd00181 Tar_Tsr_LBD IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding 45 174 1.52177E-12
Gene3D G3DSA:1.10.287.950 215 517 1.4E-89
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 366 393 2.3E-60
SUPERFAMILY SSF58104 235 516 1.03E-72
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 395 424 2.3E-60
Pfam PF00672 HAMP domain IPR003660 HAMP domain 213 262 2.5E-8
Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 483 1.4E-52
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 61 76 2.3E-60

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.