Burkholderia cenocepacia AU 1054, BCEN_RS14105

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00033
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00090 HTH_ARSR IPR011991 ArsR-like helix-turn-helix domain 9 52 1.66656E-6
Gene3D G3DSA:3.30.70.920 54 149 7.1E-28
SMART SM00344 IPR019888 Transcription regulator AsnC-type 3 112 2.5E-43
Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 8.8E-16
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 3 19 1.6E-13
SUPERFAMILY SSF54909 IPR011008 Dimeric alpha-beta barrel 63 152 1.34E-22
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 2 62 4.34E-17
ProSitePatterns PS00519 AsnC-type HTH domain signature. IPR019885 Transcription regulator HTH, AsnC-type, conserved site 21 47 -
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 30 49 1.6E-13
Pfam PF01037 Lrp/AsnC ligand binding domain IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain 70 143 2.3E-25
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 4 53 6.2E-22
PRINTS PR00033 AsnC bacterial regulatory protein HTH signature IPR000485 AsnC-type HTH domain 19 30 1.6E-13
ProSiteProfiles PS50956 AsnC-type HTH domain profile. IPR000485 AsnC-type HTH domain 3 64 36.716

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.