Burkholderia cenocepacia AU 1054, BCEN_RS14090

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_02071
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.40.10 IPR036908 RlpA-like domain superfamily 91 184 1.1E-36
Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. IPR034718 Endolytic peptidoglycan transglycosylase RlpA 25 184 23.635
SUPERFAMILY SSF50685 IPR036908 RlpA-like domain superfamily 92 179 1.88E-13
TIGRFAM TIGR00413 rlpA: rare lipoprotein A IPR012997 Rare lipoprotein A 94 185 7.9E-42
Pfam PF03330 Lytic transglycolase IPR009009 RlpA-like protein, double-psi beta-barrel domain 92 181 1.2E-24
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 5.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.