Burkholderia cenocepacia AU 1054, BCEN_RS14090
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016829 | lyase activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_02071
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| TIGRFAM | TIGR00413 | rlpA: rare lipoprotein A | IPR012997 | Rare lipoprotein A | 94 | 185 | 7.9E-42 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 21 | 5.0 | ||
| Hamap | MF_02071 | Endolytic peptidoglycan transglycosylase RlpA [rlpA]. | IPR034718 | Endolytic peptidoglycan transglycosylase RlpA | 25 | 184 | 23.635 |
| Pfam | PF03330 | Lytic transglycolase | IPR009009 | RlpA-like protein, double-psi beta-barrel domain | 92 | 181 | 1.2E-24 |
| SUPERFAMILY | SSF50685 | IPR036908 | RlpA-like domain superfamily | 92 | 179 | 1.88E-13 | |
| Gene3D | G3DSA:2.40.40.10 | IPR036908 | RlpA-like domain superfamily | 91 | 184 | 1.1E-36 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.