Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0008033 | tRNA processing |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01102
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008168 | methyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01102
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016491 | oxidoreductase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF01266
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0004808 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01102
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0055114 | oxidation-reduction process |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01102
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01102
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
MetaCyc | tRNA-uridine 2-thiolation (bacteria) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
TIGRFAM | TIGR03197 | MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain | IPR017610 | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal | 244 | 636 | 2.7E-116 |
Gene3D | G3DSA:3.40.50.150 | 8 | 217 | 1.1E-47 | |||
Gene3D | G3DSA:3.50.50.60 | IPR036188 | FAD/NAD(P)-binding domain superfamily | 242 | 634 | 1.3E-119 | |
SUPERFAMILY | SSF51905 | IPR036188 | FAD/NAD(P)-binding domain superfamily | 243 | 634 | 3.17E-32 | |
Pfam | PF05430 | S-adenosyl-L-methionine-dependent methyltransferase | IPR008471 | MnmC-like methyltransferase | 119 | 213 | 1.7E-10 |
Pfam | PF01266 | FAD dependent oxidoreductase | IPR006076 | FAD dependent oxidoreductase | 244 | 607 | 6.2E-41 |
Gene3D | G3DSA:3.30.9.10 | 328 | 547 | 1.3E-119 | |||
Hamap | MF_01102 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. | IPR023032 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 6 | 632 | 21.641 |
SUPERFAMILY | SSF54373 | 457 | 530 | 2.88E-11 |