Burkholderia ambifaria AMMD, BAMB_RS15655 (rqpR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000156 phosphorelay response regulator activity
NAS
Non-traceable Author Statement
ECO:0000303
non-traceable author statement used in manual assertion
29363827 Reviewed by curator
Biological Process GO:0000160 phosphorelay signal transduction system
ISO
Inferred from Sequence Orthology
Term mapped from: BGD:I35_RS15645
ECO:0000266
sequence orthology evidence used in manual assertion
29363827 Reviewed by curator
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00156
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00156
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS50043 LuxR-type HTH domain profile. IPR000792 Transcription regulator LuxR, C-terminal 143 208 16.39
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 164 180 9.3E-9
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 5 116 6.6E-31
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 180 192 9.3E-9
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 4 120 41.016
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 6 120 1.79141E-36
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 2 133 1.28E-35
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 150 164 9.3E-9
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 3 116 2.2E-32
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 139 211 4.76E-17
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 149 203 3.7E-14
SMART SM00421 IPR000792 Transcription regulator LuxR, C-terminal 147 204 2.6E-12
Gene3D G3DSA:3.40.50.12740 3 210 3.5E-59
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 150 206 3.1101E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.