Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS05110 (paaE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0010124 phenylacetate catabolic process
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18776009 Reviewed by curator
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00111
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00406
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0010124 phenylacetate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02160
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00406
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00111
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00175 Oxidoreductase NAD-binding domain IPR001433 Oxidoreductase FAD/NAD(P)-binding 125 232 7.0E-16
ProSiteProfiles PS51384 Ferredoxin reductase-type FAD binding domain profile. IPR017927 FAD-binding domain, ferredoxin reductase-type 4 112 15.063
Gene3D G3DSA:2.40.30.10 4 110 4.4E-21
SUPERFAMILY SSF54292 IPR036010 2Fe-2S ferredoxin-like superfamily 241 358 3.37E-27
CDD cd06214 PA_degradation_oxidoreductase_like 6 251 5.11225E-132
PRINTS PR00406 Cytochrome B5 reductase signature IPR001834 NADH:cytochrome b5 reductase-like 97 111 1.3E-8
SUPERFAMILY SSF63380 IPR017938 Riboflavin synthase-like beta-barrel 3 111 4.3E-24
Gene3D G3DSA:3.40.50.80 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain 111 254 5.0E-30
Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain 277 350 6.6E-13
PRINTS PR00406 Cytochrome B5 reductase signature IPR001834 NADH:cytochrome b5 reductase-like 159 170 1.3E-8
PRINTS PR00406 Cytochrome B5 reductase signature IPR001834 NADH:cytochrome b5 reductase-like 122 141 1.3E-8
SUPERFAMILY SSF52343 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain 100 248 7.99E-35
Pfam PF00970 Oxidoreductase FAD-binding domain IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain 17 109 2.9E-11
ProSiteProfiles PS51085 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain 271 362 10.933
Gene3D G3DSA:3.10.20.30 IPR012675 Beta-grasp domain superfamily 260 362 8.5E-27
PRINTS PR00406 Cytochrome B5 reductase signature IPR001834 NADH:cytochrome b5 reductase-like 218 226 1.3E-8
TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit 6 360 2.8E-138
CDD cd00207 fer2 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain 273 356 5.05142E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.