Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated | Inferred from Expression Pattern | ECO:0000231 quantitative polymerase chain reaction evidence |
19201791 | Reviewed by curator |
Biological Process | GO:0006355 | regulation of transcription, DNA-templated | Inferred from Expression Pattern | ECO:0000275 expression microarray evidence used in manual assertion |
19201791 | Reviewed by curator |
Biological Process | GO:0009372 | quorum sensing | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
16041013 | Reviewed by curator |
Biological Process | GO:0009372 | quorum sensing | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
19201791 | Reviewed by curator |
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00038
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
ProSitePatterns | PS00622 | LuxR-type HTH domain signature. | IPR000792 | Transcription regulator LuxR, C-terminal | 190 | 217 | - |
Pfam | PF03472 | Autoinducer binding domain | IPR005143 | Transcription factor LuxR-like, autoinducer-binding domain | 19 | 159 | 9.8E-32 |
ProSiteProfiles | PS50043 | LuxR-type HTH domain profile. | IPR000792 | Transcription regulator LuxR, C-terminal | 168 | 234 | 22.557 |
PRINTS | PR00038 | LuxR bacterial regulatory protein HTH signature | IPR000792 | Transcription regulator LuxR, C-terminal | 190 | 206 | 2.7E-9 |
CDD | cd06170 | LuxR_C_like | IPR000792 | Transcription regulator LuxR, C-terminal | 176 | 230 | 1.15491E-18 |
SMART | SM00421 | IPR000792 | Transcription regulator LuxR, C-terminal | 173 | 230 | 7.0E-18 | |
Pfam | PF00196 | Bacterial regulatory proteins, luxR family | IPR000792 | Transcription regulator LuxR, C-terminal | 176 | 229 | 1.7E-16 |
SUPERFAMILY | SSF75516 | IPR036693 | Transcription factor LuxR-like, autoinducer-binding domain superfamily | 4 | 162 | 2.22E-35 | |
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 171 | 236 | 6.3E-26 | |
SUPERFAMILY | SSF46894 | IPR016032 | Signal transduction response regulator, C-terminal effector | 161 | 236 | 1.05E-16 | |
PRINTS | PR00038 | LuxR bacterial regulatory protein HTH signature | IPR000792 | Transcription regulator LuxR, C-terminal | 206 | 218 | 2.7E-9 |
Gene3D | G3DSA:3.30.450.80 | IPR036693 | Transcription factor LuxR-like, autoinducer-binding domain superfamily | 1 | 170 | 2.0E-67 | |
PRINTS | PR00038 | LuxR bacterial regulatory protein HTH signature | IPR000792 | Transcription regulator LuxR, C-terminal | 176 | 190 | 2.7E-9 |