Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS15440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009405 pathogenesis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05658
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05658
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin IPR008635 Coiled stalk of trimeric autotransporter adhesin 242 285 3.7E-12
SUPERFAMILY SSF54523 444 556 8.63E-19
SUPERFAMILY SSF101967 278 455 1.96E-12
Pfam PF05658 Head domain of trimeric autotransporter adhesin IPR008640 Head domain of trimeric autotransporter adhesin 107 132 3.2E-5
CDD cd12820 LbR_YadA-like 69 205 7.63946E-19
Pfam PF03895 YadA-like membrane anchor domain IPR005594 YadA-like, C-terminal 498 556 1.2E-13
Gene3D G3DSA:3.30.1300.30 456 556 2.9E-17
SUPERFAMILY SSF101967 94 268 1.09E-33
Gene3D G3DSA:2.150.10.10 IPR011049 Serralysin-like metalloprotease, C-terminal 269 455 7.0E-14
SUPERFAMILY SSF101967 31 124 1.83E-15
Pfam PF05658 Head domain of trimeric autotransporter adhesin IPR008640 Head domain of trimeric autotransporter adhesin 177 203 4.2E-4
Gene3D G3DSA:2.150.10.10 IPR011049 Serralysin-like metalloprotease, C-terminal 22 150 6.9E-27
Pfam PF05658 Head domain of trimeric autotransporter adhesin IPR008640 Head domain of trimeric autotransporter adhesin 135 161 7.0E-5
Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin IPR008635 Coiled stalk of trimeric autotransporter adhesin 433 471 1.3E-9
Gene3D G3DSA:2.150.10.10 IPR011049 Serralysin-like metalloprotease, C-terminal 161 268 8.8E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.