Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:1900190 | regulation of single-species biofilm formation | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
18195023 | Reviewed by curator |
Biological Process | GO:2000145 | regulation of cell motility | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
18195023 | Reviewed by curator |
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF02954
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008134 | transcription factor binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR01590 | FIS bacterial regulatory protein HTH signature | IPR002197 | DNA binding HTH domain, Fis-type | 433 | 453 | 2.4E-5 |
Gene3D | G3DSA:3.40.50.300 | 123 | 308 | 4.1E-57 | |||
PRINTS | PR01590 | FIS bacterial regulatory protein HTH signature | IPR002197 | DNA binding HTH domain, Fis-type | 416 | 433 | 2.4E-5 |
Pfam | PF02954 | Bacterial regulatory protein, Fis family | IPR002197 | DNA binding HTH domain, Fis-type | 414 | 450 | 3.3E-11 |
Gene3D | G3DSA:1.10.10.60 | 404 | 453 | 1.3E-10 | |||
ProSitePatterns | PS00675 | Sigma-54 interaction domain ATP-binding region A signature. | IPR025662 | Sigma-54 interaction domain, ATP-binding site 1 | 160 | 173 | - |
ProSitePatterns | PS00688 | Sigma-54 interaction domain C-terminal part signature. | IPR025944 | Sigma-54 interaction domain, conserved site | 352 | 361 | - |
SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 136 | 368 | 1.13E-51 | |
CDD | cd00009 | AAA | 159 | 301 | 9.17904E-19 | ||
ProSitePatterns | PS00676 | Sigma-54 interaction domain ATP-binding region B signature. | IPR025943 | Sigma-54 interaction domain, ATP-binding site 2 | 223 | 238 | - |
ProSiteProfiles | PS50045 | Sigma-54 interaction domain profile. | IPR002078 | RNA polymerase sigma factor 54 interaction domain | 136 | 368 | 49.531 |
SMART | SM00382 | IPR003593 | AAA+ ATPase domain | 156 | 300 | 7.1E-4 | |
SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 398 | 452 | 5.38E-8 | |
Pfam | PF00158 | Sigma-54 interaction domain | IPR002078 | RNA polymerase sigma factor 54 interaction domain | 136 | 303 | 4.7E-61 |