Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS34830 (ptwC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0030255 | protein secretion by the type IV secretion system | Traceable Author Statement | ECO:0000304 traceable author statement used in manual assertion |
15342570 | Reviewed by curator |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Coils | Coil | 920 | 939 | - | |||
| SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 551 | 902 | 2.66E-22 | |
| Pfam | PF13604 | AAA domain | 427 | 641 | 4.8E-44 | ||
| CDD | cd18809 | SF1_C_RecD | 837 | 900 | 1.13314E-4 | ||
| Gene3D | G3DSA:3.40.50.300 | 713 | 912 | 5.0E-8 | |||
| TIGRFAM | TIGR02686 | relax_trwC: conjugative relaxase domain | IPR014059 | Conjugative relaxase, N-terminal | 15 | 295 | 2.0E-82 |
| Gene3D | G3DSA:3.40.50.300 | 396 | 609 | 1.9E-32 | |||
| SUPERFAMILY | SSF55464 | 1 | 296 | 2.47E-82 | |||
| Pfam | PF08751 | TrwC relaxase | IPR014862 | TrwC relaxase | 11 | 290 | 2.1E-84 |
| CDD | cd17933 | DEXSc_RecD-like | 430 | 590 | 3.14123E-33 | ||
| SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 423 | 571 | 3.36E-17 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.