Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS34720

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00392	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00392	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00345		IPR000524	Transcription regulator HTH, GntR	27	85	2.9E-9
Gene3D	G3DSA:1.20.120.530		IPR008920	Transcription regulator FadR/GntR, C-terminal	112	237	1.7E-8
PRINTS	PR00035	GntR bacterial regulatory protein HTH signature	IPR000524	Transcription regulator HTH, GntR	59	75	3.6E-6
CDD	cd07377	WHTH_GntR	IPR000524	Transcription regulator HTH, GntR	35	85	6.10788E-13
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	25	89	1.2E-12
Pfam	PF07729	FCD domain	IPR011711	GntR, C-terminal	114	231	7.9E-6
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	29	89	3.64E-13
PRINTS	PR00035	GntR bacterial regulatory protein HTH signature	IPR000524	Transcription regulator HTH, GntR	45	59	3.6E-6
SMART	SM00895		IPR011711	GntR, C-terminal	114	235	5.6E-6
SUPERFAMILY	SSF48008		IPR008920	Transcription regulator FadR/GntR, C-terminal	113	231	2.88E-8
ProSiteProfiles	PS50949	GntR-type HTH domain profile.	IPR000524	Transcription regulator HTH, GntR	21	88	14.664
Pfam	PF00392	Bacterial regulatory proteins, gntR family	IPR000524	Transcription regulator HTH, GntR	41	85	5.7E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.