Burkholderia pseudomallei 1026b, BP1026B_I0252

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006098 pentose-phosphate shunt
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001461
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF51366
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01086
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01086
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004750 ribulose-phosphate 3-epimerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001461
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bpz01230 Biosynthesis of amino acids 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bpz01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bpz00040 Pentose and glucuronate interconversions 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bpz01130 Biosynthesis of antibiotics 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bpz00710 Carbon fixation in photosynthetic organisms 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bpz00030 Pentose phosphate pathway 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bpz01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bpz01120 Microbial metabolism in diverse environments 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bpz01200 Carbon metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF001461 IPR026019 Ribulose-phosphate 3-epimerase 1 229 1.2E-105
ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. IPR000056 Ribulose-phosphate 3-epimerase-like 135 157 -
CDD cd00429 RPE IPR000056 Ribulose-phosphate 3-epimerase-like 6 219 2.59449E-118
Coils Coil 150 170 -
TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase IPR000056 Ribulose-phosphate 3-epimerase-like 6 219 2.9E-96
ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. IPR000056 Ribulose-phosphate 3-epimerase-like 33 47 -
Pfam PF00834 Ribulose-phosphate 3 epimerase family IPR000056 Ribulose-phosphate 3-epimerase-like 6 206 2.2E-90
SUPERFAMILY SSF51366 IPR011060 Ribulose-phosphate binding barrel 4 221 4.1E-74
Gene3D G3DSA:3.20.20.70 IPR013785 Aldolase-type TIM barrel 1 226 3.9E-82

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.