Apr 22, 2009 |
BCAL2872
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfA2. New product name: EcfA2. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Apr 10, 2015 |
BCAL2875
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New PubMed ID: 18771721.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2942
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2942
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2943
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IGC). New PubMed reference: 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2943
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IGC]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2944
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO Accession: GO:0009244(IGC). New PubMed reference: 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAL2944
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2944
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO accession: GO:0009244 [IGC]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2945
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO Accession: GO:0009244(IMP). New PubMed reference: 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2945
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAL2945
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 23256532.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2946
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New EC Number: 1.1.1.22. New GO Accession: GO:0009244(IMP). New GO Accession: GO:0003979(IMP). New PubMed reference: 16513737. New PubMed reference: 19383677. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2946
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New EC Number: 1.1.1.22. New GO accession: GO:0009244 [IMP]. New GO accession: GO:0003979 [IMP]. New evidence reference (PMID): 16513737. New evidence reference (PMID): 19383677. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2947
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(ISS). New PubMed reference: 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL2947
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [ISS]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3110
|
Burkholderia cenocepacia
J2315 |
New product name: WaaA. New product name confidence: Class 2. New PubMed ID: 28085228. New comment: .Annotation transferred from: UniProtKB:P0AC75.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3110
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3110
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3110
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3110
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3111
|
Burkholderia cenocepacia
J2315 |
New gene name: kdoO. New product name: Kdo 3-hydroxylase KdoO. New product name confidence: Class 2. New PubMed ID: 28085228. New PubMed ID: 21178073. New PubMed ID: 25204504. New comment: Responsible for Ko formation with Kdo2-lipid A as a substrate.Annotation transferred from: UniProtKB:E9NYT3.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3111
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3111
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3112
|
Burkholderia cenocepacia
J2315 |
New product name: heptosyltransferase I WaaC. New PubMed ID: 19525227. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3112
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3112
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3112
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3112
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3113
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3113
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3114
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3114
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3114
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3115
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3115
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3115
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3116
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3116
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3116
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3117
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3117
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IMP). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3117
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IMP]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3118
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3118
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3118
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3119
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3119
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3119
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 22, 2009 |
BCAL3119
|
Burkholderia cenocepacia
J2315 |
New product name: WbiI. New product name confidence: Class 2. New homology: 67.8% identity to whpM[P. aeruginosa PAO1]. New homology: 99% identity to WbiI[accession number AY523838]. New evidence reference (PMID): 15364998.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Apr 30, 2018 |
BCAL3120
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3120
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3120
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3121
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New PubMed ID: 26116716. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3121
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3121
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3122
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3122
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3122
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3123
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3123
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3123
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3124
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3124
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3124
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3125
|
|
New product name: pseudogene (WbxB). New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster. New comment: B cenocepacia J2315, but not K56-2, is O-antigen deficient due to a transposon insertion in this gene.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3125
|
|
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3125
|
|
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3126b
|
Burkholderia cenocepacia
J2315 |
New comment : Contains IS402 insertion sequence responsible for disrupting O-antigen production by O-antigen gene cluster.. New PubMed reference: 15687196.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3126b
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 15687196.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3128
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3129
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3130
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3131
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3132
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 21640586. New comment: .Annotation transferred from: BGD:BTH_I1472.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3133
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 21640586. New comment: .Annotation transferred from: BGD:BTH_I1471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3134
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 21640586. New comment: .Annotation transferred from: BD:BTH_I1470.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3135
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 21640586. New comment: .Annotation transferred from: BGD:BTH_I1469.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 22, 2009 |
BCAL3151
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfF. New product name: sigma factor 70 EcfF. New product name confidence: Class 2. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Apr 10, 2015 |
BCAL3240
|
Burkholderia cenocepacia
J2315 |
New product name: capsule polysaccharide export ATP-binding protein, CpxA. New gene name synonym: cpxA. New product name confidence: Class 2. New PubMed ID: 15213146. Annotation transferred from: Refseq:NP_283042.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3310
|
Burkholderia cenocepacia
J2315 |
New gene name: bcnB. New product name: BcnB. New product name confidence: Class 1. New PubMed ID: 28292982. New comment:
|
Miguel Valvano, Queen's University of Belfast
|
Apr 30, 2018 |
BCAL3311
|
Burkholderia cenocepacia
J2315 |
New gene name: bcnA. New product name: BcnA. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000279. New subcellular localization PMID: 28292982. New PubMed ID: 28292982. New comment:
|
Miguel Valvano, Queen's University of Belfast
|
Apr 22, 2009 |
BCAL3378
|
Burkholderia cenocepacia
J2315 |
New product name: ferric uptake regulator Fur. New product name confidence: Class 2. New evidence reference (PMID): 18057135.
|
Literature review. Dennis, J. J. Department of Biological Sciences, University of Alberta, Edmonton, Alberta.
|
Feb 4, 2013 |
BCAL3426
|
Burkholderia cenocepacia
J2315 |
New product name: SlyB. New gene name: slyB. New product name confidence: Class 2. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 2. New PubMed reference: 16500084.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL3455
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P0A725.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 22, 2009 |
BCAL3478
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfB. New product name: sigma factor 70 EcfB. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Apr 22, 2009 |
BCAL3486
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfM. New product name: sigma factor 70 EcfM. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Jan 25, 2011 |
BCAL3515
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(ISS). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3515
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [ISS]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3516
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3516
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3517
|
|
New comment : Contains frameshift mutation.. New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3517
|
|
New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3519
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3519
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3520
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3520
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3521
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3521
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3522
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|