Jan 25, 2011 |
BURPS1710b_0224
|
Burkholderia pseudomallei
1710b |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0124
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssJ-2. New product name: TssJ-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BURPS1710b_0225
|
Burkholderia pseudomallei
1710b |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0125
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssK-2. New product name: TssK-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BURPS1710b_0226
|
Burkholderia pseudomallei
1710b |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0126
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssL-2b. New product name: TssL-2b. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BURPS1710b_0227
|
Burkholderia pseudomallei
1710b |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0127
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssM-2. New product name: TssM-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BURPS1710b_0228
|
Burkholderia pseudomallei
1710b |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0129
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: vgrG-2. New product name: VgrG-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BURPS1710b_0229
|
Burkholderia pseudomallei
1710b |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0131
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: rhs-2. New product name: Rhs-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BURPS1710b_0230
|
Burkholderia pseudomallei
1710b |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0134
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssA-2. New product name: TssA-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BURPS1710b_0231
|
Burkholderia pseudomallei
1710b |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0135
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssG-2. New product name: TssG-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0007
|
Burkholderia pseudomallei
K96243 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0136
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssF-2. New product name: TssF-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0008
|
Burkholderia pseudomallei
K96243 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0137
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssE-2. New product name: TssE-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0009
|
Burkholderia pseudomallei
K96243 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0138
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagJ-2. New product name: TagJ-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0010
|
Burkholderia pseudomallei
K96243 |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0139
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagK-2. New product name: TagK-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0011
|
Burkholderia pseudomallei
K96243 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0140
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: clpV-2. New product name: ClpV-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0012
|
Burkholderia pseudomallei
K96243 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1885
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssM-4. New product name: TssM-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0013
|
Burkholderia pseudomallei
K96243 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 22, 2009 |
BCAL2686
|
Burkholderia cenocepacia
J2315 |
New product name: transcription factor CysB. New product name confidence: Class 1. New evidence reference (PMID): 16997956.
|
Literature review. Hryniewicz, M. M. Polish academy of Sciences, Warsaw, Poland
|
Apr 22, 2009 |
BCAL1656
|
Burkholderia cenocepacia
J2315 |
New product name: transcription factor SsuR. New product name confidence: Class 1. New evidence reference (PMID): 16997956.
|
Literature review. Hryniewicz, M. M. Polish academy of Sciences, Warsaw, Poland
|
Sep 15, 2008 |
Bcen_4887
|
|
New gene name: pehA. New product name: pectic hydrolase enzyme A, PehA. New product name confidence: Class 1. New subcellular localization confidence: Class 1. New homology: 84% identity to PehA [Burkholderia cepacia ATCC 25416]. New evidence reference (PMID): 17493828. New evidence reference (PMID): 17627609.
|
Literature review. Massa, C. Structural Biology Laboratory, Trieste, Italy
|
Aug 1, 2008 |
Bcen_4887
|
|
New homology: 100% identity to PehA [Burkholderia cepacia ATCC 25416]. New evidence reference (PMID): 17493828. New evidence reference (PMID): 17627609.
|
Literature review. Massa, C. Structural Biology Laboratory, Trieste, Italy
|
Aug 25, 2008 |
Bcep18194_C6706
|
|
New gene name: prnA. New product name: tryptophan halogenase, PrnA. New product name confidence: Class 2. New homology: 94% identity to tryptophan halogenase, PrnA [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Aug 25, 2008 |
Bcenmc03_6983
|
Burkholderia cenocepacia
MC0-3 |
New gene name: prnA. New product name: tryptophan halogenase, PrnA. New product name confidence: Class 2. New homology: 91% identity to tryptophan halogenase, PrnA [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Aug 25, 2008 |
Bamb_4726
|
|
New gene name: prnA. New product name: tryptophan halogenase, PrnA. New product name confidence: Class 2. New homology: 90% identity to tryptophan halogenase, PrnA [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Aug 25, 2008 |
Bcep18194_C6707
|
|
New gene name: prnB. New product name: PrnB. New product name confidence: Class 2. New homology: 90% identity to PrnB [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Aug 25, 2008 |
Bamb_4727
|
|
New gene name: prnB. New product name confidence: Class 2. New homology: 85% identity to PrnB [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Aug 25, 2008 |
Bcenmc03_6984
|
Burkholderia cenocepacia
MC0-3 |
New gene name: prnB. New product name confidence: Class 2. New homology: 83% identity to PrnB [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Aug 25, 2008 |
Bcep18194_C6708
|
|
New gene name: prnC. New product name: PrnC. New product name confidence: Class 2. New homology: 97% identity to PrnC [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Aug 25, 2008 |
Bcenmc03_6985
|
Burkholderia cenocepacia
MC0-3 |
New gene name: prnC. New product name: PrnC. New product name confidence: Class 2. New homology: 95% identity to PrnC [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Aug 25, 2008 |
Bamb_4728
|
|
New gene name: prnC. New product name: PrnC. New product name confidence: Class 2. New homology: 93% identity to PrnC [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Aug 25, 2008 |
Bcep18194_C6709
|
|
New gene name: prnD. New product name: PrnD. New product name confidence: Class 2. New homology: 92% identity to PrnD [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Aug 25, 2008 |
Bcenmc03_6986
|
Burkholderia cenocepacia
MC0-3 |
New gene name: prnD. New product name: PrnD. New product name confidence: Class 2. New homology: 88% identity to PrnD [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Aug 25, 2008 |
Bamb_4729
|
|
New gene name: prnD. New product name: PrnD. New product name confidence: Class 2. New homology: 89% identity to PrnD [B. cepacia LT-4-12W]. New evidence reference (PMID): 17905875.
|
Literature Review. Raaijmakers, Jos M. Wageningen University, Wageningen, The Netherlands
|
Sep 15, 2008 |
Bcen_1152
|
|
New gene name: ecfI. New product name: sigma factor 70 EcfI. New product name confidence: Class 2. New homology: 90% identity to ecfI[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Sep 15, 2008 |
Bcen_3641
|
|
New gene name: cepI. New product name: autoinducer synthase CepI. New product name confidence: Class 1. New homology: 98% identity to CepI[B. cepacia K56-2] [accession number AF019654]. New evidence reference (PMID): 11402012.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Sep 15, 2008 |
Bcen2424_1632
|
|
New gene name: ecfI. New product name: sigma factor 70 EcfI. New product name confidence: Class 1. New homology: 90% identity to ecfI[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Sep 15, 2008 |
Bcen2424_4726
|
|
New gene name: cepI. New product name: autoinducer synthase CepI. New product name confidence: Class 1. New homology: 98% identity to CepI[B. cepacia K56-2] [accession number AF019654]. New evidence reference (PMID): 11402012.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Sep 15, 2008 |
Bcenmc03_5574
|
Burkholderia cenocepacia
MC0-3 |
New gene name: cepI. New product name: autoinducer synthase CepI. New product name confidence: Class 1. New homology: 99% identity to CepI[B. cepacia K56-2] [accession number AF019654]. New evidence reference (PMID): 11402012.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Sep 15, 2008 |
Bcep18194_A4778
|
|
New gene name: ecfI. New product name: sigma factor 70 EcfI. New product name confidence: Class 2. New homology: 90% identity to ecfI[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Sep 15, 2008 |
Bcep18194_B1050
|
|
New gene name: cepI. New product name: autoinducer synthase CepI. New product name confidence: Class 1. New homology: 99% identity to CepI[B. cepacia K56-2] [accession number AF019654]. New evidence reference (PMID): 11402012.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Sep 15, 2008 |
Bamb_1529
|
|
New gene name: ecfI. New product name: sigma factor 70 EcfI. New product name confidence: Class 2. New homology: 89% identity to ecfI[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Sep 15, 2008 |
Bamb_4118
|
|
New gene name: cepI. New product name: autoinducer synthase CepI. New product name confidence: Class 1. New homology: 96% identity to CepI[B. cepacia K56-2] [accession number AF019654]. New evidence reference (PMID): 11402012.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Aug 25, 2008 |
Bcen2424_0980
|
|
New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 89% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560.
|
Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
|
Aug 25, 2008 |
Bcen_0501
|
|
New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 89% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560.
|
Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
|
Aug 25, 2008 |
Bcep18194_A4085
|
|
New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 89% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560.
|
Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
|
Aug 25, 2008 |
Bcep1808_0897
|
Burkholderia vietnamiensis
G4 |
New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 89% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560.
|
Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
|
Aug 25, 2008 |
Bamb_0841
|
|
New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 86% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560.
|
Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
|
Sep 15, 2008 |
Bcen_5637
|
|
New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 95% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823.
|
Literature review. Schell, M. A. University of Georgia, Athens, Georgia
|
Sep 15, 2008 |
Bcen_5637
|
|
New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 95% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823.
|
Literature review. Schell, M. A. University of Georgia, Athens, Georgia
|
Apr 22, 2009 |
BCAS0222
|
Burkholderia cenocepacia
J2315 |
New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 94% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823.
|
Literature review. Schell, M. A. University of Georgia, Athens, Georgia
|
Apr 22, 2009 |
BCAM0379
|
Burkholderia cenocepacia
J2315 |
New gene name: atsR. New product name: adherence and T6 secretion system regulator AtsR. New product name confidence: Class 1. New homology: 19% identity to RetS [P. aeruginosa]. New evidence reference (PMID): 18316384.
|
Literature review. Schell, M. A. University of Georgia, Athens, Georgia
|
Sep 15, 2008 |
Bcen_3641
|
|
New gene name: cepI. New product name: acyl-homoserine lactone synthase CepI. New product name confidence: Class 1. New homology: 89% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056.
|
Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
|
Sep 15, 2008 |
Bcen2424_4726
|
|
New gene name: cepI. New product name: acyl-homoserine lactone synthase CepI. New product name confidence: Class 1. New homology: 89% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056.
|
Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
|
Sep 15, 2008 |
Bcenmc03_5574
|
Burkholderia cenocepacia
MC0-3 |
New gene name: cepI. New product name: acyl-homoserine lactone synthase CepI. New product name confidence: Class 1. New homology: 89% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056.
|
Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
|
Sep 15, 2008 |
Bcep18194_B1050
|
|
New gene name: cepI. New product name: acyl-homoserine lactone synthase CepI. New product name confidence: Class 1. New homology: 91% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056.
|
Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
|
Apr 22, 2009 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New homology: 90% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056.
|
Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
|
Sep 15, 2008 |
Bamb_4118
|
|
New homology: 94% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056.
|
Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
|
Aug 1, 2008 |
Bcen2424_1644
|
|
New product name: ornibactin receptor precursor, OrbA. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 94% identity to ornibactin receptor precursor [B. cenocepacia K56-2]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 11083764.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_1164
|
|
New product name: ornibactin receptor precursor, OrbA. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 94% identity to ornibactin receptor precursor [B. cenocepacia K56-2]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 11083764.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcep18194_A4790
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New product name: ornibactin receptor precursor, OrbA. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 91% identity to ornibactin receptor precursor [B. cenocepacia K56-2]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 11083764.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bamb_1541
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New gene name: orbA. New product name: ornibactin receptor precursor, OrbA. New product name confidence: Class 1. New subcellular localization confidence: Class 1. New evidence reference (PMID): 17295049. New evidence reference (PMID): 11083764.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcen2424_4993
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New product name: Fe(III)-pyochelin outer membrane receptor precursor. New product name confidence: Class 2. New homology: 60% identity to Fe[III]-pyochelin outer membrane receptor precursor [P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 8288523.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcen_3374
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New product name: Fe(III)-pyochelin outer membrane receptor precursor. New product name confidence: Class 2. New homology: 60% identity to Fe[III]-pyochelin outer membrane receptor precursor [P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 8288523.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcep18194_B0677
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New product name: Fe(III)-pyochelin outer membrane receptor precursor. New product name confidence: Class 2. New homology: 60% identity to Fe[III]-pyochelin outer membrane receptor precursor [P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 8288523.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcen2424_1634
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New gene name: orbG. New product name: putative dioxygenase, OrbG. New product name confidence: Class 3. New homology: 99% identity to putative dioxygenase, OrbG[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcen_1154
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New gene name: orbG. New product name: putative dioxygenase, OrbG. New product name confidence: Class 3. New homology: 99% identity to putative dioxygenase, OrbG[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcep18194_A4780
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New product name: putative dioxygenase, OrbG. New product name confidence: Class 3. New homology: 98% identity to putative dioxygenase, OrbG[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bamb_1531
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New gene name: orbG. New product name: putative dioxygenase, OrbG. New product name confidence: Class 3. New homology: 95% identity to putative dioxygenase, OrbG[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcen2424_1642
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New product name: ornibactin biosynthesis protein, OrbK. New product name confidence: Class 3. New homology: 94% identity to ornibactin biosynthesis protein, OrbK[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcen_1162
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New product name: ornibactin biosynthesis protein, OrbK. New product name confidence: Class 3. New homology: 94% identity to ornibactin biosynthesis protein, OrbK[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcep18194_A4788
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|
New product name: ornibactin biosynthesis protein, OrbK. New product name confidence: Class 3. New homology: 90% identity to ornibactin biosynthesis protein, OrbK[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bamb_1539
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New product name: ornibactin biosynthesis protein, OrbK. New product name confidence: Class 3. New homology: 86% identity to ornibactin biosynthesis protein, OrbK[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcen2424_1643
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|
New product name: L-ornithine N5-oxygenase. New product name confidence: Class 2. New homology: 51% identity to L-ornithine N5-oxygenase, PvdA[P. aeruginosa PAO1]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcen_1163
|
|
New product name: L-ornithine N5-oxygenase. New product name confidence: Class 2. New homology: 51% identity to L-ornithine N5-oxygenase, PvdA[P. aeruginosa PAO1]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bamb_1540
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|
New product name: L-ornithine N5-oxygenase. New product name confidence: Class 2. New homology: 51% identity to L-ornithine N5-oxygenase, PvdA[P. aeruginosa PAO1]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcep18194_A4789
|
|
New product name: L-ornithine N5-oxygenase. New product name confidence: Class 2. New homology: 51% identity to L-ornithine N5-oxygenase, PvdA[P. aeruginosa PAO1]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcen2424_1645
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|
New gene name: pvdF. New product name: pyoverdine synthetase F. New product name confidence: Class 2. New homology: 98.9% identity to PvdF[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcen_1165
|
|
New gene name: pvdF. New product name: pyoverdine synthetase F. New product name confidence: Class 2. New homology: 98.9% identity to PvdF[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bamb_1542
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|
New gene name: pvdF. New product name: pyoverdine synthetase F. New product name confidence: Class 2. New homology: 94.6% identity to PvdF[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
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Aug 1, 2008 |
Bcep18194_A4791
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|
New gene name: pvdF. New product name: pyoverdine synthetase F. New product name confidence: Class 2. New homology: 94.2% identity to PvdF[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen2424_1640
|
|
New product name: ornibactin biosynthesis non-ribosomal peptide, OrbI. New product name confidence: Class 3. New homology: 96% identity to ornibactin biosynthesis non-ribosomal peptide, OrbI[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
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Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_1160
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|
New product name: ornibactin biosynthesis non-ribosomal peptide, OrbI. New product name confidence: Class 3. New homology: 96% identity to ornibactin biosynthesis non-ribosomal peptide, OrbI[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcep18194_A4786
|
|
New product name: ornibactin biosynthesis non-ribosomal peptide, OrbI. New product name confidence: Class 3. New homology: 93% identity to ornibactin biosynthesis non-ribosomal peptide, OrbI[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bamb_1537
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|
New product name: ornibactin biosynthesis non-ribosomal peptide, OrbI. New product name confidence: Class 3. New homology: 91% identity to ornibactin biosynthesis non-ribosomal peptide, OrbI[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen2424_1641
|
|
New product name: ornibactin biosynthesis non-ribosomal peptide, OrbJ. New product name confidence: Class 3. New homology: 95% identity to ornibactin biosynthesis non-ribosomal peptid, OrbJ[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_1161
|
|
New product name: ornibactin biosynthesis non-ribosomal peptide, OrbJ. New product name confidence: Class 3. New homology: 95% identity to ornibactin biosynthesis non-ribosomal peptid, OrbJ[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcep18194_A4787
|
|
New product name: ornibactin biosynthesis non-ribosomal peptide, OrbJ. New product name confidence: Class 3. New homology: 92% identity to ornibactin biosynthesis non-ribosomal peptid, OrbJ[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bamb_1538
|
|
New product name: ornibactin biosynthesis non-ribosomal peptide, OrbJ. New product name confidence: Class 3. New homology: 91% identity to ornibactin biosynthesis non-ribosomal peptid, OrbJ[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|