Log of Annotation Updates

653 annotation updates returned 1234567Next
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Date Locus Tag Strain Description Submitter
Jan 25, 2011 Bxe_A1420 Burkholderia xenovorans LB400 New comment : ALDHC is preferentially active towards linear medium-chain to long-chain aldehydes as compared to branched-chain, short-chain or aromatic aldehydes. Reorientation of an extended loop (Asn478-Pro490) is responsible for the constricted structure of the substrate tunnel, with the side chain of Asn478 imposing steric restrictions on branched-chain and aromatic aldehydes. A key glycine (Gly104) positioned at the mouth of the tunnel allows for maximum tunnel depth required to bind the linear medium to long aliphatic chain of the native substrate. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 Bxe_A1420 Burkholderia xenovorans LB400 New product name confidence: Class 2. New comment : Expressed as a hexa-histidine-tagged fusion in Escherichia coli BL21 Star (DE3). ALDHC in complex with NADPH bound in the cofactor binding pocket and an ordered fragment of a polyethylene glycol molecule bound in the substrate tunnel, to 1.6 A resolution. Belongs to space group P1. The ALDHC monomer comprises three distinct domains, an N-terminal cofactor (NAD/P+)-binding domain, a catalytic domain, and an oligomerization domain. New EC Number: 1.2.1.5. New GO Accession: GO:0004030(IDA). New PubMed reference: 18462753. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2248 Burkholderia cenocepacia J2315 New product name: Group I Sfp-type phosphopantetheinyl transferase, PobA. New gene name: pobA. New product name confidence: Class 1. New pathway: pyochelin and ornibactin biosynthesis. New GO Accession: GO:0033212(IMP). New PubMed reference: 20966087. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2235 Burkholderia cenocepacia J2315 New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2234 Burkholderia cenocepacia J2315 New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2233 Burkholderia cenocepacia J2315 New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2232 Burkholderia cenocepacia J2315 New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2231 Burkholderia cenocepacia J2315 New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2230 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(ISS). New PubMed reference: 9846750. New PubMed reference: 18931103. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2228 Burkholderia cenocepacia J2315 New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2227 Burkholderia cenocepacia J2315 New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2226 Burkholderia cenocepacia J2315 New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2225 Burkholderia cenocepacia J2315 New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2224 Burkholderia cenocepacia J2315 New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1702 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1701 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1700 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1699 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1698 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1697 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IMP). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1696 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IMP). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1695 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1694 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1693 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1692 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1691 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1690 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1689 Burkholderia cenocepacia J2315 New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1688 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IMP). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAS0156 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO Accession: GO:0008800(ISS). New PubMed reference: 14982755. New PubMed reference: 18931103. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM1779 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO Accession: GO:0008800(ISS). New PubMed reference: 12821450. New PubMed reference: 18931103. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0393 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO Accession: GO:0008800(ISS). New PubMed reference: 9333046. New PubMed reference: 18931103. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2165 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New pathway: beta-Lactam resistance. New GO Accession: GO:0008800(ISS). New PubMed reference: 19075063. New PubMed reference: 9371340. New PubMed reference: 18931103. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2829 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New subcellular localization: Periplasmic. New subcellular localization confidence: Class 1. New EC Number: 3.4.21.107. New PubMed reference: 17220310. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2643 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New subcellular localization: Periplasmic. New subcellular localization confidence: Class 1. New EC Number: 1.15.1.1. New GO Accession: GO:0004784(IDA). New PubMed reference: 17325048. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BURPS1106A_3356 Burkholderia pseudomallei 1106a New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 12832453. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BURPS1710b_3366 Burkholderia pseudomallei 1710b New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 12832453. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BURPS668_3322 Burkholderia pseudomallei 668 New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 12832453. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BPSL2865 Burkholderia pseudomallei K96243 New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 12832453. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2107 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 17371508. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0865 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0864 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0863 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0862 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0861 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0860 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0859 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0858 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0856 Burkholderia cenocepacia J2315 New gene name: bceD. New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New PubMed reference: 11006084. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0855 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New PubMed reference: 19383677. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0854 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New EC Number: 5.3.1.8;2.7.7.22. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0004476(IDA). New GO Accession: GO:0008928(IDA). New GO Accession: GO:0003979(IDA). New PubMed reference: 14637140. New PubMed reference: 11006084. New PubMed reference: 18668237. New PubMed reference: 17184737. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1935 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1934 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1933 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1932 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1931 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1930 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL1929 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2947 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(ISS). New PubMed reference: 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2946 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New EC Number: 1.1.1.22. New GO Accession: GO:0009244(IMP). New GO Accession: GO:0003979(IMP). New PubMed reference: 16513737. New PubMed reference: 19383677. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2945 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO Accession: GO:0009244(IMP). New PubMed reference: 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2944 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO Accession: GO:0009244(IGC). New PubMed reference: 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2943 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IGC). New PubMed reference: 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2942 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL0967 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. New PubMed reference: 10543742. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3112 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3110 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2409 Burkholderia cenocepacia J2315 New product name: DnaE. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IGC). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2408 Burkholderia cenocepacia J2315 New product name: MsbA. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IGC). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2407 Burkholderia cenocepacia J2315 New product name: WabS. New gene name: wabS. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2406 Burkholderia cenocepacia J2315 New product name: wabR. New gene name: wabR. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2405 Burkholderia cenocepacia J2315 New product name: waaL. New gene name: waaL. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2404 Burkholderia cenocepacia J2315 New product name: wabQ. New gene name: wabQ. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2403 Burkholderia cenocepacia J2315 New product name: WabP. New gene name: wabP. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2402 Burkholderia cenocepacia J2315 New product name: WabO. New gene name: wabO. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3126b Burkholderia cenocepacia J2315 New comment : Contains IS402 insertion sequence responsible for disrupting O-antigen production by O-antigen gene cluster.. New PubMed reference: 15687196. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3125 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3124 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3123 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3122 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3121 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3120 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3119 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3118 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3117 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IMP). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3116 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3115 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3114 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3113 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3112 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3111 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3110 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2059 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2058 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2057 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2056 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2055 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2054 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2053 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2052 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
653 annotation updates returned 1234567Next