Burkholderia mallei Ivan

Strain Overview
Organism Name Burkholderia mallei Ivan
Species Burkholderia mallei
Strain Ivan
Description/Title Burkholderia mallei Str. Ivan, NCTC 10230
Annotated Genes 4749
Partial Genes 189
Host Information
Host Species Common Name Equus
Host Species Disease Glanders
Host Species Tissue Sampled Missing
Geographic Location
Location Name Hungary
Isolation Source Missing
Latitude/Longitude Missing
Sample Provider
Name Richard Winegar
E-mail submit@cbiocorp.com
Institution MRIGlobal
Date Collected 1961

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000986905.1
Assembly Status latest
Scaffolds
Contigs 263
Contig N50 50429
Assembly Level Contig
Percent GC
Cross-References
NCBI BioSample Accession SAMN03418621
NCBI Taxonomy ID 13373
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details

Annotated Features

Feature Count
gene 4749
CDS 4693
pseudo 260
tRNA 51
rRNA 4
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2090
Cytoplasmic Membrane 943
Periplasmic 158
Outer Membrane 101
Extracellular 73
Unknown 1278
Unknown (This protein may have multiple localization sites) 138
Flagellar 24
Fimbrial 3
Host Associated 2
T3SS 3

Replicons

263 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF