Burkholderia Genome Database

Burkholderia mallei 11

Strain Overview
Organism Name	Burkholderia mallei 11
Species	Burkholderia mallei
Strain	11
Description/Title	Microbe sample Burkholderia mallei 11
Annotated Genes	5063
Partial Genes	55

Host Information
Host Species Taxonomic Name

Geographic Location
Location Name	Turkey
Isolation Source	human

Sample Provider
Name	Shannon Johnson
E-mail	shannonj@lanl.gov
Institution	Los Alamos National Laboratory
Date Collected	1949

MLST Data

Database	Scheme	Sequence Type	Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

Assembly
Assembly DB	RefSeq
Assembly Accession	GCF_000959405.1
Assembly Status	latest
Scaffolds
Contigs
Contig N50
Assembly Level	Complete Genome
Percent GC

Cross-References
NCBI BioSample Accession	SAMN03079578
NCBI Taxonomy ID	13373
NCBI Bioprojects	PRJNA238562

Related Data
Additional Genome Project Info	More on PRJNA238562
Sequencing Information
Genome Assembly Information	Details

Genome Browsers^*
Burkholderia mallei strain 11 chromosome I, complete sequence.
Burkholderia mallei strain 11 chromosome II, complete sequence.

Annotated Features

Feature	Count
gene	5063
CDS	4995
pseudo	172
tRNA	57
rRNA	10
ncRNA	1

Subcellular Localization

Localization	Count
Cytoplasmic	2277
Cytoplasmic Membrane	982
Periplasmic	160
Outer Membrane	107
Extracellular	75
Unknown	1335
Unknown (This protein may have multiple localization sites)	142
Flagellar	23
Fimbrial	3
Host Associated	2
T3SS	3

Replicons

Name	Length	GC
Burkholderia mallei strain 11 chromosome I, complete sequence.	3559874 bp	68.2%	Replicon details
Burkholderia mallei strain 11 chromosome II, complete sequence.	2353260 bp	69.0%	Replicon details

Download Sequences

Download Gene Annotations

GFF3 + sequence