Burkholderia Genome Database

Burkholderia mallei SR092700I

Strain Overview
Organism Name	Burkholderia mallei SR092700I
Species	Burkholderia mallei
Strain	SR092700I
Description/Title	Microbe sample from Burkholderia mallei
Annotated Genes	4772
Partial Genes	314

Host Information
Host Species Taxonomic Name

Geographic Location
Location Name	unknown
Isolation Source	unknown

Sample Provider
Name	Hajnalka Daligault
E-mail	hajkis@lanl.gov
Institution	Los Alamos National Laboratory
Date Collected	unknown

MLST Data

Database	Scheme	Sequence Type	Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

Assembly
Assembly DB	RefSeq
Assembly Accession	GCF_000756865.1
Assembly Status	latest
Scaffolds	2
Contigs	246
Contig N50	36810
Assembly Level	Scaffold
Percent GC

Cross-References
NCBI BioSample Accession	SAMN02837859
NCBI Taxonomy ID	13373
NCBI Bioprojects	PRJNA244051

Related Data
Additional Genome Project Info	More on PRJNA244051
Sequencing Information
Genome Assembly Information	Details

Annotated Features

Feature	Count
gene	4772
CDS	4710
pseudo	352
tRNA	56
rRNA	5
ncRNA	1

Subcellular Localization

Localization	Count
Cytoplasmic	2096
Cytoplasmic Membrane	937
Periplasmic	158
Outer Membrane	101
Extracellular	72
Unknown	1294
Unknown (This protein may have multiple localization sites)	134
Flagellar	24
Fimbrial	3
Host Associated	2
T3SS	3

Replicons

Name	Length	GC
Burkholderia mallei strain SR092700I genomic scaffold scaffold1, whole genome shotgun sequence.	3418715 bp	67.9%	Replicon details
Burkholderia mallei strain SR092700I genomic scaffold scaffold2, whole genome shotgun sequence.	2280722 bp	68.7%	Replicon details

Download Sequences

Download Gene Annotations

GFF3 + sequence