Burkholderia gladioli MSMB1756

Strain Overview
Organism Name Burkholderia gladioli MSMB1756
Species Burkholderia gladioli
Strain MSMB1756
Description/Title Pathogen: environmental/food/other sample from Burkholderia gladioli
Annotated Genes 6798
Partial Genes 134
Host Information
Host Species Taxonomic Name unknown
Geographic Location
Isolation Source soil
Latitude/Longitude unknown
Sample Provider
Name Jason Sahl
E-mail jasonsahl@gmail.com
Institution Northern Arizona University
Date Collected

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds
Contigs 87
Contig N50 260680
Assembly Level Contig
Percent GC
Cross-References
NCBI BioSample Accession SAMN03449320
NCBI Taxonomy ID 28095
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 6798
CDS 6733
pseudo 132
tRNA 58
ncRNA 3
rRNA 3
tmRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 3004
Cytoplasmic Membrane 1471
Periplasmic 208
Outer Membrane 173
Extracellular 107
Unknown 1533
Unknown (This protein may have multiple localization sites) 236
Flagellar 8
Fimbrial 6
Host Associated 1
T3SS 1

Replicons

87 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF