Burkholderia dolosa AU0158

Strain Overview
Organism Name Burkholderia dolosa AU0158 (complete genome)
Species Burkholderia dolosa
Strain AU0158
Subspecific Genetic Lineage genomovar VI
Description/Title Microbe sample Burkholderia dolosa AU0158
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Annotated Genes 5641
References
Partial Genes 45
Cross-References
NCBI BioSample Accession SAMN03144971
NCBI Biosample ID 3144971
NCBI Taxonomy ID 350701
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 5641
CDS 5558
pseudo 73
tRNA 67
rRNA 15
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2410
Cytoplasmic Membrane 1163
Periplasmic 193
Outer Membrane 131
Extracellular 85
Unknown 1425
Unknown (This protein may have multiple localization sites) 153
Flagellar 22
Fimbrial 5
T3SS 3
Sample Provider
Name Shannon Johnson
E-mail shannonj@lanl.gov
Institution Los Alamos National Laboratory
Date Collected Unknown
Geographic Location
Location Name USA
Isolation Source Human Clinical (cystic fibrosis patient)
Host Information
Host Species Taxonomic Name Homo sapiens
Host Species Common Name human
Host Species Taxonomy ID 9606

Replicons

Name Length GC
Burkholderia dolosa AU0158 chromosome 1, complete sequence. 3406596 bp 66.9%
Replicon details
Burkholderia dolosa AU0158 chromosome 2, complete sequence. 2168075 bp 67.3%
Replicon details
Burkholderia dolosa AU0158 chromosome 3, complete sequence. 834424 bp 66.9%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF

Download Intergenic Region Annotations

File also contains gene annotations

GTF