Burkholderia anthina AZ-4-2-10-S1-D7

Strain Overview
Organism Name Burkholderia anthina AZ-4-2-10-S1-D7
Species Burkholderia anthina
Strain AZ-4-2-10-S1-D7
Subspecific Genetic Lineage
Description/Title Pathogen: environmental/food/other sample from Burkholderia anthina
Scaffolds
Contigs 4
Contig N50 2118531
Assembly Level Chromosome
Percent GC
Annotated Genes 6325
References
Partial Genes 47
Cross-References
NCBI BioSample Accession SAMN03449213
NCBI Biosample ID
NCBI Taxonomy ID 179879
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
*Note: Objects in Genome Browser currently link back to the non-beta version of www.pseudomonas.com

Annotated Features

Feature Count
gene 6325
CDS 6231
pseudo 75
tRNA 71
rRNA 19
ncRNA 3
tmRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2737
Cytoplasmic Membrane 1344
Periplasmic 213
Outer Membrane 152
Extracellular 90
Unknown 1514
Unknown (This protein may have multiple localization sites) 190
Flagellar 24
Fimbrial 7
T3SS 4
Sample Provider
Name Jason Sahl
E-mail jasonsahl@gmail.com
Institution Northern Arizona University
Date Collected 2012
Geographic Location
Location Name USA: Tucson, Pima, AZ
Isolation Source soil
Latitude/Longitude 32.0401973286826 N 110.564982129428 W
Host Information
Host Species Taxonomic Name unknown

Replicons

Name Length GC
Burkholderia anthina strain AZ-4-2-10-S1-D7 AZ-4-2-10-S1-D7_4, whole genome shotgun sequence. 2118531 bp 66.9%
Replicon details
Burkholderia anthina strain AZ-4-2-10-S1-D7 AZ-4-2-10-S1-D7_5, whole genome shotgun sequence. 640657 bp 68.1%
Replicon details
Burkholderia anthina strain AZ-4-2-10-S1-D7 chromosome 1, complete sequence, whole genome shotgun sequence. 3550762 bp 67.1%
Replicon details
Burkholderia anthina strain AZ-4-2-10-S1-D7 chromosome 3, complete sequence, whole genome shotgun sequence. 963101 bp 67.7%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF

Download Intergenic Region Annotations

File also contains gene annotations

GTF