Burkholderia anthina AZ-4-2-10-S1-D7

Strain Overview
Organism Name Burkholderia anthina AZ-4-2-10-S1-D7
Species Burkholderia anthina
Strain AZ-4-2-10-S1-D7
Description/Title Pathogen: environmental/food/other sample from Burkholderia anthina
Scaffolds
Contigs 4
Contig N50 2118531
Assembly Level Chromosome
Percent GC
Annotated Genes 6325
Partial Genes 47
Cross-References
NCBI BioSample Accession SAMN03449213
NCBI Taxonomy ID 179879
NCBI Bioprojects
Assembly DB
RefSeq
Assembly Accession
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
Burkholderia anthina strain AZ-4-2-10-S1-D7 chromosome 1, complete sequence, whole genome shotgun sequence.
Burkholderia anthina strain AZ-4-2-10-S1-D7 chromosome 3, complete sequence, whole genome shotgun sequence.
Burkholderia anthina strain AZ-4-2-10-S1-D7 AZ-4-2-10-S1-D7_4, whole genome shotgun sequence.
Burkholderia anthina strain AZ-4-2-10-S1-D7 AZ-4-2-10-S1-D7_5, whole genome shotgun sequence.

Annotated Features

Feature Count
gene 6325
CDS 6231
pseudo 75
tRNA 71
rRNA 19
ncRNA 3
tmRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2737
Cytoplasmic Membrane 1344
Periplasmic 213
Outer Membrane 152
Extracellular 90
Unknown 1514
Unknown (This protein may have multiple localization sites) 190
Flagellar 24
Fimbrial 7
T3SS 4
Sample Provider
Name Jason Sahl
E-mail jasonsahl@gmail.com
Institution Northern Arizona University
Date Collected 2012
Geographic Location
Location Name USA: Tucson, Pima, AZ
Isolation Source soil
Latitude/Longitude 32.0401973286826 N 110.564982129428 W
Host Information
Host Species Taxonomic Name unknown

Replicons

Name Length GC
Burkholderia anthina strain AZ-4-2-10-S1-D7 chromosome 1, complete sequence, whole genome shotgun sequence. 3550762 bp 67.1%
Replicon details
Burkholderia anthina strain AZ-4-2-10-S1-D7 chromosome 3, complete sequence, whole genome shotgun sequence. 963101 bp 67.7%
Replicon details
Burkholderia anthina strain AZ-4-2-10-S1-D7 AZ-4-2-10-S1-D7_4, whole genome shotgun sequence. 2118531 bp 66.9%
Replicon details
Burkholderia anthina strain AZ-4-2-10-S1-D7 AZ-4-2-10-S1-D7_5, whole genome shotgun sequence. 640657 bp 68.1%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF

Download Intergenic Region Annotations

File also contains gene annotations

GTF